CDS

Accession Number TCMCG006C81175
gbkey CDS
Protein Id XP_013692324.1
Location complement(join(16715170..16715190,16715288..16715347,16715480..16715585,16715679..16715815,16715906..16715988,16716069..16716174,16716262..16716358,16716447..16716730,16716986..16717139,16717540..16717614,16717738..16717754,16717864..16717923,16718078..16718183,16718360..16718505,16718598..16718680,16718772..16718877,16718990..16719086,16719158..16719441,16719511..16719664,16719869..16719915))
Gene LOC106396472
GeneID 106396472
Organism Brassica napus

Protein

Length 740aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013836870.2
Definition tyrosine--tRNA ligase 2, cytoplasmic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R02918        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K01866        [VIEW IN KEGG]
EC 6.1.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004831        [VIEW IN EMBL-EBI]
GO:0004832        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006438        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAATGCACCAACTCAGGCTTCTTCTTTGGCCTCCGGATTGCAGATAAGCGAGGAGGTCGAACAAAGATTCAACCTAGTTAAAAGTGTTGGCGAGCAATGCACACATGATGATGAGCTGAGGGAGCTTCTGGCTAAGAAGGCTGCTCCGGTTTGTTACGATGGCTTTGAACCATCAGGAAGGATGCATATCGCTCAAGGACTGATGAAGATCATGAGTGTGAACAAACTGACTTCTGCTGGTTGCCGAGTGAAGATCTGGATTGCAGATTGGTTTGCGTATATGAACAACAAGCTGGGAGGTGATTTGAAGAAAATCAGGGTGGTTGGAGAATATTTCAAGGAGATCTTTCAGGCTGCCGGGATGAACTGTGAGAATGTGGAGTTTTTATGGTCATCCGAAGAGATTAATGCTAGGGGAGATGAGTACTGGCCTCTTGTCATGGACATTGCCTGCAGAAACAGTCTCGCCAAAATAAAACGGTGTATGCCTATTATGGGTCATAGTGAGACCGAGGAGCTGAGTGCAGCTCACATTCTGTACGTGTGTATGCAATGTGCCGACACTCTCTTCCTTGAGGCTGATATTTGCCAGCTTGGGATGGATCAGGAAACGGTTAATCTGCTAGCGAGAGACTATTGTGATGACATTAACAGAGGAAACAGACCTGTCATCTTGTCTCACCATATGCTTCGTGGTCTTCAACAAGGACAGACAAAGATGTCTAAGAGTGATCCTTCGTCTGCCATCTTCATGGAAGATGAGGAGGCTGAAGTTAATGTGAAGATAAAGAAAGCCTACTGCCCTCCGGGTATTGTGGAAGGTAACCCATGCGTGGAGTACGTCAGATACATCATTCTGCCCTGGTTCAATGAATTCACAGTAGAGCGAGACGAAAAGTATGGTGGTAGCAAGACCTACAAAAGCTATGAAGACATTGTCACTGACTATGAGAGCAATGTGTTGCATCCTAAGGATCTAAAGGACGCTCTGTCGAAAGCATTGAATAAAATACTGCAACCTGTCCGTGACCATTTCAAAACCAACAGTCGTGCCAAGAATCTGCTAAAACAGGTCAAGGGCTACAAAATCACCAGAACGGCTCTATCCAAGGAGATGGAGGCTCTTTCCGTCAACGCACCAAACTCAGCATCTTCAGCTGCCGGATTACAGCTGAGCGAGGAGGTAGAGAATAAATACAATATTGTGAGGAGTATTGGCGAGGAGTGCATACAAGAGGATGAGCTAAAGAACCTGTTAGCCAAGAAGCCCACTCCGATCTGCTATGATGGATTTGAACCATCAGGAAGGATGCACATTGCCCAGGGAGTGATGAAGGTCACCAATGTGAACAAGTTGACAACAGCTGGTTGCCAAGTGAAAATTTGGATTGCAGATTGGTTTGCTCAACTGAACAACAAGTTGGGAGGTGACTTGGAGAGAATCAAAGTGGTTGGAGAATACTTCAAGGAGATTTGGCAAGCTGGTGGTATGAACACTGACAAAGTAAGCTTTCTTTGGGCTTCAGACGAAATTAATGGTAGAGGCGGTAAGTATTGGCCTCTTGTGATGGACATTGCTCGCAGAAACAACCTCCGTCGAATCTTGAGGTGTGGGCAGATTATGGGACGTAGTGAGACAGAGGTGCTGAGTGCAGCGCAGATTCTTTACCCTTGTATGCAGTGTGCTGATATTTTCTTACTCGAGGCTGATATTTGCCAGCTGGGGATGGATCAGAGGAAAGTAAACATGTTAGCAAGAGAATACTGTGATGACATTAAGAGAAAGAACAAACCCATCATCTTGTCCCACCATATGCTTCCTGGTCTCCAACAAGGACAAGAGAAGATGTCGAAAAGTAATCCATCATCTGCCATTTTTATGGAAGATGAGGAGGCTGATGTTAAGGAGAAGATCAGCAAAGCTTATTGCCCAGCAAGAATTGTGGAAGGCAATCCATGTCTTGAATACGTCAAATACTTAGTTCTACCACGATTCAATGAGTTCACGGTTGAAACTGATGGCAGTAACAAGACCTTCAAAAGCTTTGAAGATATTGTTGCTGACTACGAGAACGGCGCGTTGGCTCCTGAAGATCTGAAGAAAGCCTTGGTGAAAGCACTGAATATAATGCTGCAACCTGTTCGTGACCATTTCAAAACCAACGATCGCGCCAAAAATCTACTGGAACAGGTCAAGGCTTTTAGAGTCACCAGGTGA
Protein:  
MENAPTQASSLASGLQISEEVEQRFNLVKSVGEQCTHDDELRELLAKKAAPVCYDGFEPSGRMHIAQGLMKIMSVNKLTSAGCRVKIWIADWFAYMNNKLGGDLKKIRVVGEYFKEIFQAAGMNCENVEFLWSSEEINARGDEYWPLVMDIACRNSLAKIKRCMPIMGHSETEELSAAHILYVCMQCADTLFLEADICQLGMDQETVNLLARDYCDDINRGNRPVILSHHMLRGLQQGQTKMSKSDPSSAIFMEDEEAEVNVKIKKAYCPPGIVEGNPCVEYVRYIILPWFNEFTVERDEKYGGSKTYKSYEDIVTDYESNVLHPKDLKDALSKALNKILQPVRDHFKTNSRAKNLLKQVKGYKITRTALSKEMEALSVNAPNSASSAAGLQLSEEVENKYNIVRSIGEECIQEDELKNLLAKKPTPICYDGFEPSGRMHIAQGVMKVTNVNKLTTAGCQVKIWIADWFAQLNNKLGGDLERIKVVGEYFKEIWQAGGMNTDKVSFLWASDEINGRGGKYWPLVMDIARRNNLRRILRCGQIMGRSETEVLSAAQILYPCMQCADIFLLEADICQLGMDQRKVNMLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSNPSSAIFMEDEEADVKEKISKAYCPARIVEGNPCLEYVKYLVLPRFNEFTVETDGSNKTFKSFEDIVADYENGALAPEDLKKALVKALNIMLQPVRDHFKTNDRAKNLLEQVKAFRVTR